The X-Men were manipulated by Darkseid into dreaming and seeing visions of their former teammate, Phoenix. They then visited Grey's House and found that her parents, Elaine and John Grey, also had dreams and visions of her. Professor X that there were strange incidents had occurred where the Jean had used the Phoenix Force's powers. Following the trail, the X-Men encountered Deathstroke the Terminator and while they were able to destroy the Psi-Phon , he defeated and captured them.
They were taken to the Source Wall, where Darkseid used the Psychon-Wave to resurrect Dark Phoenix. The villains left, and the X-Men teamed-up with the Teen Titans, who had been captured due to being at Professor Charles Xavier's School for Gifted Youngsters. Cyborg discovered an abandoned Mobius Chair and, after Changeling and Sprite accidentally figured out how it worked, the two teams returned to New York City. They followed the villains to their base and during the ensuring battle, Raven and Professor X psychically weakened the Phoenix-entity so that it was forced to possess the body of Cyclops to survive. Reunion with her former lover returned Phoenix's memory of her life as Jean Grey, and she turned on Darkseid in revenge for his having reawakened her from death. In a mammoth explosion, both Darkseid and Dark Phoenix vanished.
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